Dashboard

Column

Screened (Target): 1199 (1500)

Enrolled (Target): 463 (609)

Average screened per month

106

Average enrolled per month

46

Column

Study Flow & Monthly Cascade (Cumulative Numbers), Updated on 2023-04-25

Daily trend of screening and enrollment

Monthly trend of screening and enrollment

Column

Follow-up status at enroll and follow-up visits (Cumulative Numbers)

Follow-up status by number of visits (Head count)

% of number of visits at each follow-up month

Study Data

Column

Characteristics

HPV Result

Characteristic

Total N = 11531

Positive 489 (42.4)1

Negative 664 (57.6)1

Study Strata

FSW <30 HIV-

432 (42.4)

194 (45.1)

238 (40.5)

FSW <30 HIV+

31 (3.0)

17 (4.0)

14 (2.4)

FSW 30+ HIV-

419 (41.2)

153 (35.6)

266 (45.2)

FSW 30+ HIV+

99 (9.7)

49 (11.4)

50 (8.5)

MSM <30 HIV-

22 (2.2)

6 (1.4)

16 (2.7)

MSM <30 HIV+

8 (0.8)

8 (1.9)

0 (0.0)

MSM 30+ HIV-

4 (0.4)

0 (0.0)

4 (0.7)

MSM 30+ HIV+

3 (0.3)

3 (0.7)

0 (0.0)

Missing

135

59

76

Age category

<30

506 (48.7)

233 (53.0)

273 (45.7)

30+

532 (51.3)

207 (47.0)

325 (54.3)

Missing

115

49

66

Gender Category

FSW

1,105 (96.3)

467 (96.3)

638 (96.4)

MSM

42 (3.7)

18 (3.7)

24 (3.6)

Missing

6

4

2

HIV Status

Negative

979 (86.4)

395 (82.3)

584 (89.4)

Positive

154 (13.6)

85 (17.7)

69 (10.6)

Missing

20

9

11

1n (%)

GeneXpert Results

Column

LTFU by months & visits

Missing AGE

Missing SEX

Missing HIV Status

R Session Info

R version 4.2.2 (2022-10-31 ucrt)
Platform: x86_64-w64-mingw32/x64 (64-bit)
Running under: Windows 10 x64 (build 22621)

Matrix products: default

locale:
[1] LC_COLLATE=English_United States.utf8 
[2] LC_CTYPE=English_United States.utf8   
[3] LC_MONETARY=English_United States.utf8
[4] LC_NUMERIC=C                          
[5] LC_TIME=English_United States.utf8    

attached base packages:
[1] stats     graphics  grDevices utils     datasets  methods   base     

other attached packages:
 [1] flexdashboard_0.6.1 glue_1.6.2          sjlabelled_1.2.0   
 [4] gtsummary_1.7.0     lubridate_1.9.2     forcats_1.0.0      
 [7] stringr_1.5.0       dplyr_1.1.0         purrr_1.0.1        
[10] readr_2.1.4         tidyr_1.3.0         tibble_3.1.8       
[13] ggplot2_3.4.1       tidyverse_2.0.0    

loaded via a namespace (and not attached):
 [1] fontquiver_0.2.1        insight_0.19.0          httr_1.4.5             
 [4] tools_4.2.2             bslib_0.4.2             DT_0.27                
 [7] utf8_1.2.3              R6_2.5.1                lazyeval_0.2.2         
[10] colorspace_2.1-0        withr_2.5.0             tidyselect_1.2.0       
[13] curl_5.0.0              compiler_4.2.2          textshaping_0.3.6      
[16] cli_3.6.0               gt_0.8.0                flextable_0.8.6        
[19] xml2_1.3.3              officer_0.6.0           plotly_4.10.1          
[22] fontBitstreamVera_0.1.1 labeling_0.4.2          sass_0.4.5             
[25] scales_1.2.1            askpass_1.1             systemfonts_1.0.4      
[28] commonmark_1.8.1        digest_0.6.31           foreign_0.8-83         
[31] rmarkdown_2.20          gfonts_0.2.0            rio_0.5.29             
[34] pkgconfig_2.0.3         htmltools_0.5.4         fastmap_1.1.1          
[37] highr_0.10              htmlwidgets_1.6.1       rlang_1.0.6            
[40] readxl_1.4.2            rstudioapi_0.14         httpcode_0.3.0         
[43] shiny_1.7.4             jquerylib_0.1.4         farver_2.1.1           
[46] generics_0.1.3          jsonlite_1.8.4          crosstalk_1.2.0        
[49] zip_2.2.2               magrittr_2.0.3          Rcpp_1.0.10            
[52] munsell_0.5.0           fansi_1.0.4             gdtools_0.3.1          
[55] lifecycle_1.0.3         stringi_1.7.12          yaml_2.3.7             
[58] snakecase_0.11.0        grid_4.2.2              promises_1.2.0.1       
[61] crayon_1.5.2            haven_2.5.1             hms_1.1.2              
[64] knitr_1.42              pillar_1.8.1            uuid_1.1-0             
[67] crul_1.3                evaluate_0.20           fontLiberation_0.1.0   
[70] data.table_1.14.8       broom.helpers_1.12.0    ggprism_1.0.4          
[73] vctrs_0.5.2             tzdb_0.3.0              httpuv_1.6.9           
[76] cellranger_1.1.0        openssl_2.0.5           gtable_0.3.1           
[79] cachem_1.0.7            openxlsx_4.2.5.2        xfun_0.37              
[82] mime_0.12               janitor_2.2.0           xtable_1.8-4           
[85] later_1.3.0             ragg_1.2.5              viridisLite_0.4.1      
[88] memoise_2.0.1           timechange_0.2.0        ellipsis_0.3.2         
 package           * version date (UTC) lib source
 askpass             1.1     2019-01-13 [1] CRAN (R 4.2.1)
 broom.helpers       1.12.0  2023-02-09 [1] CRAN (R 4.2.2)
 bslib               0.4.2   2022-12-16 [1] CRAN (R 4.2.2)
 cachem              1.0.7   2023-02-24 [1] CRAN (R 4.2.2)
 cellranger          1.1.0   2016-07-27 [1] CRAN (R 4.2.1)
 cli                 3.6.0   2023-01-09 [1] CRAN (R 4.2.2)
 colorspace          2.1-0   2023-01-23 [1] CRAN (R 4.2.2)
 commonmark          1.8.1   2022-10-14 [1] CRAN (R 4.2.2)
 crayon              1.5.2   2022-09-29 [1] CRAN (R 4.2.1)
 crosstalk           1.2.0   2021-11-04 [1] CRAN (R 4.2.1)
 crul                1.3     2022-09-03 [1] CRAN (R 4.2.2)
 curl                5.0.0   2023-01-12 [1] CRAN (R 4.2.2)
 data.table          1.14.8  2023-02-17 [1] CRAN (R 4.2.2)
 digest              0.6.31  2022-12-11 [1] CRAN (R 4.2.2)
 dplyr             * 1.1.0   2023-01-29 [1] CRAN (R 4.2.2)
 DT                  0.27    2023-01-17 [1] CRAN (R 4.2.2)
 ellipsis            0.3.2   2021-04-29 [1] CRAN (R 4.2.1)
 evaluate            0.20    2023-01-17 [1] CRAN (R 4.2.2)
 fansi               1.0.4   2023-01-22 [1] CRAN (R 4.2.2)
 farver              2.1.1   2022-07-06 [1] CRAN (R 4.2.1)
 fastmap             1.1.1   2023-02-24 [1] CRAN (R 4.2.2)
 flexdashboard     * 0.6.1   2023-01-23 [1] CRAN (R 4.2.2)
 flextable           0.8.6   2023-02-23 [1] CRAN (R 4.2.2)
 fontBitstreamVera   0.1.1   2017-02-01 [1] CRAN (R 4.2.0)
 fontLiberation      0.1.0   2016-10-15 [1] CRAN (R 4.2.0)
 fontquiver          0.2.1   2017-02-01 [1] CRAN (R 4.2.2)
 forcats           * 1.0.0   2023-01-29 [1] CRAN (R 4.2.2)
 foreign             0.8-83  2022-09-28 [2] CRAN (R 4.2.2)
 gdtools             0.3.1   2023-02-17 [1] CRAN (R 4.2.2)
 generics            0.1.3   2022-07-05 [1] CRAN (R 4.2.1)
 gfonts              0.2.0   2023-01-08 [1] CRAN (R 4.2.2)
 ggplot2           * 3.4.1   2023-02-10 [1] CRAN (R 4.2.2)
 ggprism             1.0.4   2022-11-04 [1] CRAN (R 4.2.2)
 glue              * 1.6.2   2022-02-24 [1] CRAN (R 4.2.1)
 gt                  0.8.0   2022-11-16 [1] CRAN (R 4.2.2)
 gtable              0.3.1   2022-09-01 [1] CRAN (R 4.2.1)
 gtsummary         * 1.7.0   2023-01-13 [1] CRAN (R 4.2.2)
 haven               2.5.1   2022-08-22 [1] CRAN (R 4.2.1)
 highr               0.10    2022-12-22 [1] CRAN (R 4.2.2)
 hms                 1.1.2   2022-08-19 [1] CRAN (R 4.2.1)
 htmltools           0.5.4   2022-12-07 [1] CRAN (R 4.2.2)
 htmlwidgets         1.6.1   2023-01-07 [1] CRAN (R 4.2.2)
 httpcode            0.3.0   2020-04-10 [1] CRAN (R 4.2.2)
 httpuv              1.6.9   2023-02-14 [1] CRAN (R 4.2.2)
 httr                1.4.5   2023-02-24 [1] CRAN (R 4.2.2)
 insight             0.19.0  2023-01-30 [1] CRAN (R 4.2.2)
 janitor             2.2.0   2023-02-02 [1] CRAN (R 4.2.2)
 jquerylib           0.1.4   2021-04-26 [1] CRAN (R 4.2.1)
 jsonlite            1.8.4   2022-12-06 [1] CRAN (R 4.2.2)
 knitr               1.42    2023-01-25 [1] CRAN (R 4.2.2)
 labeling            0.4.2   2020-10-20 [1] CRAN (R 4.2.0)
 later               1.3.0   2021-08-18 [1] CRAN (R 4.2.1)
 lazyeval            0.2.2   2019-03-15 [1] CRAN (R 4.2.1)
 lifecycle           1.0.3   2022-10-07 [1] CRAN (R 4.2.1)
 lubridate         * 1.9.2   2023-02-10 [1] CRAN (R 4.2.2)
 magrittr            2.0.3   2022-03-30 [1] CRAN (R 4.2.1)
 memoise             2.0.1   2021-11-26 [1] CRAN (R 4.2.1)
 mime                0.12    2021-09-28 [1] CRAN (R 4.2.0)
 munsell             0.5.0   2018-06-12 [1] CRAN (R 4.2.1)
 officer             0.6.0   2023-02-17 [1] CRAN (R 4.2.2)
 openssl             2.0.5   2022-12-06 [1] CRAN (R 4.2.2)
 openxlsx            4.2.5.2 2023-02-06 [1] CRAN (R 4.2.2)
 pillar              1.8.1   2022-08-19 [1] CRAN (R 4.2.1)
 pkgconfig           2.0.3   2019-09-22 [1] CRAN (R 4.2.1)
 plotly              4.10.1  2022-11-07 [1] CRAN (R 4.2.2)
 promises            1.2.0.1 2021-02-11 [1] CRAN (R 4.2.1)
 purrr             * 1.0.1   2023-01-10 [1] CRAN (R 4.2.2)
 R6                  2.5.1   2021-08-19 [1] CRAN (R 4.2.1)
 ragg                1.2.5   2023-01-12 [1] CRAN (R 4.2.2)
 Rcpp                1.0.10  2023-01-22 [1] CRAN (R 4.2.2)
 readr             * 2.1.4   2023-02-10 [1] CRAN (R 4.2.2)
 readxl              1.4.2   2023-02-09 [1] CRAN (R 4.2.2)
 rio                 0.5.29  2021-11-22 [1] CRAN (R 4.2.1)
 rlang               1.0.6   2022-09-24 [1] CRAN (R 4.2.1)
 rmarkdown           2.20    2023-01-19 [1] CRAN (R 4.2.2)
 rstudioapi          0.14    2022-08-22 [1] CRAN (R 4.2.1)
 sass                0.4.5   2023-01-24 [1] CRAN (R 4.2.2)
 scales              1.2.1   2022-08-20 [1] CRAN (R 4.2.1)
 sessioninfo         1.2.2   2021-12-06 [1] CRAN (R 4.2.1)
 shiny               1.7.4   2022-12-15 [1] CRAN (R 4.2.2)
 sjlabelled        * 1.2.0   2022-04-10 [1] CRAN (R 4.2.1)
 snakecase           0.11.0  2019-05-25 [1] CRAN (R 4.2.1)
 stringi             1.7.12  2023-01-11 [1] CRAN (R 4.2.2)
 stringr           * 1.5.0   2022-12-02 [1] CRAN (R 4.2.2)
 systemfonts         1.0.4   2022-02-11 [1] CRAN (R 4.2.3)
 textshaping         0.3.6   2021-10-13 [1] CRAN (R 4.2.1)
 tibble            * 3.1.8   2022-07-22 [1] CRAN (R 4.2.1)
 tidyr             * 1.3.0   2023-01-24 [1] CRAN (R 4.2.2)
 tidyselect          1.2.0   2022-10-10 [1] CRAN (R 4.2.1)
 tidyverse         * 2.0.0   2023-02-22 [1] CRAN (R 4.2.2)
 timechange          0.2.0   2023-01-11 [1] CRAN (R 4.2.2)
 tzdb                0.3.0   2022-03-28 [1] CRAN (R 4.2.1)
 utf8                1.2.3   2023-01-31 [1] CRAN (R 4.2.2)
 uuid                1.1-0   2022-04-19 [1] CRAN (R 4.2.0)
 vctrs               0.5.2   2023-01-23 [1] CRAN (R 4.2.2)
 viridisLite         0.4.1   2022-08-22 [1] CRAN (R 4.2.1)
 withr               2.5.0   2022-03-03 [1] CRAN (R 4.2.2)
 xfun                0.37    2023-01-31 [1] CRAN (R 4.2.2)
 xml2                1.3.3   2021-11-30 [1] CRAN (R 4.2.1)
 xtable              1.8-4   2019-04-21 [1] CRAN (R 4.2.1)
 yaml                2.3.7   2023-01-23 [1] CRAN (R 4.2.2)
 zip                 2.2.2   2022-10-26 [1] CRAN (R 4.2.2)

 [1] C:/Users/drmyo/AppData/Local/R/win-library/4.2
 [2] C:/Program Files/R/R-4.2.2/library